Bioconductor Data visualization

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11k

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Deseq2 rlog transformation data visualization

8.6 years ago sunil.mangalam • 0

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716

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deseq2 RNA-Seq uniform distribution data visualization

updated 4.2 years ago by Steve Lianoglou ★ 13k • written 4.2 years ago by Ndimensional ▴ 20

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1.9k

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pathview data visualization

updated 8.2 years ago by Luo Weijun ★ 1.6k • written 8.2 years ago by Guido Hooiveld ★ 3.9k

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621

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data visualization

7.4 years ago tarek_2050 • 0

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1.9k

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pathview Kegg rnaseq data visualization

updated 7.8 years ago by Luo Weijun ★ 1.6k • written 7.8 years ago by rafre • 0

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2.5k

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rnaseq pathview data visualization

updated 8.5 years ago by Luo Weijun ★ 1.6k • written 8.5 years ago by amoltej ▴ 10

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828

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FlowSet data visualization cellcounts

6.9 years ago Maria • 0

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1.1k

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data science data visualization machine learning cancer Job

6.1 years ago • updated 5.9 years ago Shamith.Samarajiwa ▴ 180

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460

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differentially expressed genes mds plot data visualization

5.1 years ago pratikshasharma47 • 0

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1.6k

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bioinformatics bioinformatician job data visualization Job

8.6 years ago Doe, Aimee ▴ 40

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Comment: deseq2 results by sajadahmad41454 • 0

could you please tell me if the results are fine or not? ![pca summary][1] ![pca plot][2] [1]: /media/images/ee7d8693-bcbe-4a7a-a566-d3…

Answer: normalization using Deseq2 by ATpoint ★ 4.1k

counts(dds, normalized=TRUE)

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Poonam • 0

Hi Michael, I have tried what you suggested. I started with methylation loci. I created segment1 and segment2 but how to combine them bec…

Comment: EGSEA usage with microarray data (with vooma)? by Chris • 0

Hi Pekka, I also try EGSEA with microarray data. However, I got this error. Would you please have a suggestion? gsa = egsea.ma(numeric…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 42k

> Any suggestions for methylation data segmentation? I think the same segmentation can be used.

Votes

A: Volcanoplot with limma - RAW P-values or Adj.P-Values

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Answer: minfi latest update for EPIC V2 chip

A: Error in DESeqDataSet : some values in assay are not integers

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